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  5. AMTR_s00017p00209650

AMTR_s00017p00209650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.135

Description : Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000265 (Archaeplastida) Phylogenetic Tree(s): OG0000265_tree ,
OG_05_0000354 (LandPlants) Phylogenetic Tree(s): OG_05_0000354_tree ,
OG_06_0000265 (SeedPlants) Phylogenetic Tree(s): OG_06_0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00209650
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT2G17880 No alias Chaperone DnaJ-domain superfamily protein 0.03 Archaeplastida
AT4G36040 No alias Chaperone DnaJ-domain superfamily protein 0.03 Archaeplastida
GSVIVT01006408001 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01014782001 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01021014001 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_01235 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Gb_02868 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
Gb_04899 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
Gb_04900 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
Gb_09159 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida
Gb_09162 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_36084 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os08g43490.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10426451g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10427494g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_116117g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
MA_19658g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_241669g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
MA_276247g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida
MA_281725g0010 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
MA_356104g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
MA_673025g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_696786g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Pp3c12_8390V3.1 No alias DNAJ-like 20 0.02 Archaeplastida
Pp3c4_1450V3.1 No alias DNAJ-like 20 0.02 Archaeplastida
Solyc04g081530.1.1 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
Solyc07g065960.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g065970.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e001518_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003997_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e017189_P001 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e024686_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025612_P001 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008242 omega peptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 46 109
No external refs found!