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  5. Smo421832

Smo421832


Description : tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica


Gene families : OG0002426 (Archaeplastida) Phylogenetic Tree(s): OG0002426_tree ,
OG_05_0000868 (LandPlants) Phylogenetic Tree(s): OG_05_0000868_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo421832
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Smo428761 No alias No description available 0.04 Archaeplastida
Smo432179 No alias No description available 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!