AMTR_s00017p00218450 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.161

Description : Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana

Gene families : OG0000009 (Archaeplastida) Phylogenetic Tree(s): OG0000009_tree ,
OG_05_0001389 (LandPlants) Phylogenetic Tree(s): OG_05_0001389_tree ,
OG_06_0000720 (SeedPlants) Phylogenetic Tree(s): OG_06_0000720_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00017p00218450
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00238510	evm_27.TU.AmTr_v1...	Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01016439001	No alias	Protein degradation.peptidase families.serine-type...	0.03	Archaeplastida
GSVIVT01019901001	No alias	Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01027583001	No alias	Protein degradation.peptidase families.serine-type...	0.02	Archaeplastida
GSVIVT01036167001	No alias	Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana	0.03	Archaeplastida
LOC_Os02g44590.1	No alias	Subtilisin-like protease SBT1.4 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os03g02750.1	No alias	Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os03g06290.1	No alias	protease (SBT3)	0.02	Archaeplastida
LOC_Os04g35140.1	No alias	Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10430934g0010	No alias	No annotation	0.03	Archaeplastida
MA_18240g0010	No alias	protease (SBT1)	0.03	Archaeplastida
Mp6g14210.1	No alias	protease (SBT2)	0.02	Archaeplastida
Pp3c17_20710V3.1	No alias	subtilisin-like serine protease 3	0.02	Archaeplastida
Pp3c19_18770V3.1	No alias	Subtilase family protein	0.02	Archaeplastida
Pp3c3_35680V3.1	No alias	subtilisin-like serine protease 3	0.02	Archaeplastida
Solyc01g091920.2.1	No alias	protease (SBT1)	0.03	Archaeplastida
Solyc01g091930.3.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc03g078200.3.1	No alias	protease (SBT2)	0.03	Archaeplastida
Zm00001e004853_P002	No alias	protease (SBT1)	0.02	Archaeplastida
Zm00001e006441_P001	No alias	Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e014044_P001	No alias	protease (SBT5)	0.02	Archaeplastida
Zm00001e015366_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e040582_P001	No alias	Subtilisin-like protease SBT1.4 OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
CC	GO:0005666	RNA polymerase III complex	IEP	Neighborhood
CC	GO:0005741	mitochondrial outer membrane	IEP	Neighborhood
BP	GO:0006383	transcription by RNA polymerase III	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
CC	GO:0030880	RNA polymerase complex	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0031968	organelle outer membrane	IEP	Neighborhood
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Neighborhood
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000209	Peptidase_S8/S53_dom	30	153

External Links

No external refs found!

AMTR_s00017p00218450 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation