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  5. Smo42421

Smo42421


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0005684 (Archaeplastida) Phylogenetic Tree(s): OG0005684_tree ,
OG_05_0005038 (LandPlants) Phylogenetic Tree(s): OG_05_0005038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo42421
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018636001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
LOC_Os07g30100.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c13_9770V3.1 No alias RPM1 interacting protein 2 0.02 Archaeplastida
Zm00001e010369_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044599 AP-5 adaptor complex IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 288 332
No external refs found!