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  5. AMTR_s00017p00244380

AMTR_s00017p00244380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.225

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component


Gene families : OG0000350 (Archaeplastida) Phylogenetic Tree(s): OG0000350_tree ,
OG_05_0005295 (LandPlants) Phylogenetic Tree(s): OG_05_0005295_tree ,
OG_06_0007372 (SeedPlants) Phylogenetic Tree(s): OG_06_0007372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00244380
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AT1G77300 LAZ2, CCR1,... histone methyltransferases(H3-K4 specific);histone... 0.07 Archaeplastida
Cpa|evm.model.tig00001073.18 No alias Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
GSVIVT01008805001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
Gb_19296 No alias class II/ASH1 histone methyltransferase component of... 0.03 Archaeplastida
LOC_Os02g34850.1 No alias class II/ASH1 histone methyltransferase component of... 0.03 Archaeplastida
Mp1g17790.1 No alias class III/Trithorax histone methyltransferase component... 0.06 Archaeplastida
Mp8g18560.1 No alias class II/ASH1 histone methyltransferase component of... 0.03 Archaeplastida
Pp3c1_33770V3.1 No alias histone methyltransferases(H3-K4 specific);histone... 0.02 Archaeplastida
Pp3c24_20920V3.1 No alias SET domain protein 25 0.03 Archaeplastida
Pp3c2_12540V3.1 No alias histone methyltransferases(H3-K4 specific);histone... 0.05 Archaeplastida
Solyc01g006220.3.1 No alias class II/ASH1 histone methyltransferase component of... 0.02 Archaeplastida
Solyc04g057880.3.1 No alias class II/ASH1 histone methyltransferase component of... 0.04 Archaeplastida
Solyc06g059960.4.1 No alias class II/ASH1 histone methyltransferase component of... 0.04 Archaeplastida
Zm00001e033782_P001 No alias class II/ASH1 histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e039307_P005 No alias class III/Trithorax histone methyltransferase component... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 1248 1354
IPR011124 Znf_CW 1076 1123
No external refs found!