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  5. AMTR_s00018p00168390

AMTR_s00018p00168390


Description : Histone H3.2 OS=Pisum sativum


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0042140 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0036616 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00168390
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT5G65350 HTR11 histone 3 11 0.07 Archaeplastida
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.05 Archaeplastida
LOC_Os02g25940.1 No alias histone (H3) 0.02 Archaeplastida
MA_10432805g0020 No alias histone (H3) 0.03 Archaeplastida
MA_475294g0010 No alias histone (H3) 0.03 Archaeplastida
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.03 Archaeplastida
Mp3g09090.1 No alias histone (H3) 0.02 Archaeplastida
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Solyc12g056540.1.1 No alias histone (H3) 0.04 Archaeplastida
Zm00001e018263_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e040876_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!