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  5. Smo438068

Smo438068


Description : Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.MCM6 component


Gene families : OG0005516 (Archaeplastida) Phylogenetic Tree(s): OG0005516_tree ,
OG_05_0006925 (LandPlants) Phylogenetic Tree(s): OG_05_0006925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo438068
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00194270 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.03 Archaeplastida
Cpa|evm.model.tig00020918.5 No alias Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.02 Archaeplastida
Cre03.g178650 No alias Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.02 Archaeplastida
GSVIVT01003253001 No alias DNA replication licensing factor MCM6 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_23970 No alias component MCM6 of MCM replicative DNA helicase complex 0.02 Archaeplastida
MA_15713g0010 No alias component MCM6 of MCM replicative DNA helicase complex 0.05 Archaeplastida
Mp4g14930.1 No alias component MCM6 of MCM replicative DNA helicase complex 0.05 Archaeplastida
Pp3c23_390V3.1 No alias minichromosome maintenance (MCM2/3/5) family protein 0.03 Archaeplastida
Zm00001e027149_P002 No alias component MCM6 of MCM replicative DNA helicase complex 0.08 Archaeplastida
Zm00001e031306_P002 No alias component MCM6 of MCM replicative DNA helicase complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR027925 MCM_N 214 316
No external refs found!