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  5. Smo438214

Smo438214


Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo438214
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT1G69690 No alias TCP family transcription factor 0.03 Archaeplastida
AT3G47620 AtTCP14, TCP14 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Archaeplastida
AT5G08330 No alias TCP family transcription factor 0.03 Archaeplastida
GSVIVT01026145001 No alias Multi-process regulation.circadian clock.morning element... 0.04 Archaeplastida
MA_16752g0010 No alias transcription factor (TCP) 0.04 Archaeplastida
MA_635g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_81710g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_96244g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g09490.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Pp3c10_20400V3.1 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Archaeplastida
Pp3c3_24450V3.1 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.01 Archaeplastida
Pp3c3_24660V3.1 No alias TCP family transcription factor 0.03 Archaeplastida
Solyc01g103780.4.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc08g080150.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e015209_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.04 Archaeplastida
Zm00001e016271_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.02 Archaeplastida
Zm00001e018800_P001 No alias transcription factor (TCP). TCP20 circadian clock... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 40 105
No external refs found!