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  4. Sequence
  5. Smo438351

Smo438351


Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-xylose synthesis.UDP-D-glucuronic acid decarboxylase


Gene families : OG0000787 (Archaeplastida) Phylogenetic Tree(s): OG0000787_tree ,
OG_05_0004259 (LandPlants) Phylogenetic Tree(s): OG_05_0004259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo438351
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00191270 evm_27.TU.AmTr_v1... Carbohydrate metabolism.nucleotide sugar... 0.03 Archaeplastida
AT5G59290 ATUXS3, UXS3 UDP-glucuronic acid decarboxylase 3 0.03 Archaeplastida
GSVIVT01025597001 No alias Carbohydrate metabolism.nucleotide sugar... 0.04 Archaeplastida
Gb_33566 No alias UDP-D-glucuronic acid decarboxylase 0.02 Archaeplastida
LOC_Os01g21320.1 No alias UDP-D-glucuronic acid decarboxylase 0.02 Archaeplastida
LOC_Os01g62020.1 No alias UDP-D-glucuronic acid decarboxylase 0.04 Archaeplastida
LOC_Os03g16980.1 No alias UDP-D-glucuronic acid decarboxylase 0.09 Archaeplastida
MA_158402g0010 No alias UDP-D-glucuronic acid decarboxylase 0.03 Archaeplastida
Pp3c14_15630V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Archaeplastida
Solyc09g005810.4.1 No alias UDP-D-glucuronic acid decarboxylase 0.04 Archaeplastida
Zm00001e001241_P001 No alias UDP-D-glucuronic acid decarboxylase 0.06 Archaeplastida
Zm00001e019359_P001 No alias UDP-D-glucuronic acid decarboxylase 0.02 Archaeplastida
Zm00001e038475_P001 No alias UDP-D-glucuronic acid decarboxylase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 40 334
No external refs found!