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Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor
Gene families : OG0003118 (Archaeplastida) Phylogenetic Tree(s): OG0003118_tree ,
OG_05_0002467 (LandPlants) Phylogenetic Tree(s): OG_05_0002467_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo441144 | |
| Cluster | HCCA: Cluster_141 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G22760 | No alias | PHD finger family protein | 0.03 | Archaeplastida | |
| AT5G35210 | No alias | metalloendopeptidases;zinc ion binding;DNA binding | 0.03 | Archaeplastida | |
| GSVIVT01031411001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | Archaeplastida | |
| Gb_21810 | No alias | PHD finger transcription factor | 0.04 | Archaeplastida | |
| MA_10689g0010 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida | |
| Pp3c7_5480V3.1 | No alias | metalloendopeptidases;zinc ion binding;DNA binding | 0.02 | Archaeplastida | |
| Zm00001e009150_P001 | No alias | No annotation | 0.02 | Archaeplastida | |
| Zm00001e035778_P001 | No alias | PHD finger transcription factor | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| CC | GO:0005777 | peroxisome | IEP | Neighborhood |
| BP | GO:0005991 | trehalose metabolic process | IEP | Neighborhood |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0006914 | autophagy | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0017038 | protein import | IEP | Neighborhood |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
| CC | GO:0042579 | microbody | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028942 | WHIM1_dom | 373 | 405 |
| No external refs found! |