1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo441321

Smo441321


Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo441321
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT1G69690 No alias TCP family transcription factor 0.02 Archaeplastida
AT3G27010 AT-TCP20, TCP20,... TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family... 0.02 Archaeplastida
AT3G45150 TCP16 TCP domain protein 16 0.04 Archaeplastida
AT3G47620 AtTCP14, TCP14 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.05 Archaeplastida
AT5G08330 No alias TCP family transcription factor 0.04 Archaeplastida
AT5G23280 No alias TCP family transcription factor 0.04 Archaeplastida
AT5G51910 No alias TCP family transcription factor 0.03 Archaeplastida
GSVIVT01023283001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
LOC_Os02g42380.1 No alias transcription factor (TCP) 0.02 Archaeplastida
LOC_Os02g51280.1 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_2101g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
Pp3c3_24660V3.1 No alias TCP family transcription factor 0.03 Archaeplastida
Solyc03g116320.3.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc05g007420.2.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc08g080150.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e015209_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 277 418
No external refs found!