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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS12 component
Gene families : OG0002902 (Archaeplastida) Phylogenetic Tree(s): OG0002902_tree ,
OG_05_0002767 (LandPlants) Phylogenetic Tree(s): OG_05_0002767_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo441919 | |
| Cluster | HCCA: Cluster_180 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00095p00079060 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.11 | Archaeplastida | |
| AT1G15930 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.09 | Archaeplastida | |
| AT2G32060 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.2 | Archaeplastida | |
| Cpa|evm.model.tig00020903.34 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.21 | Archaeplastida | |
| Cre04.g214503 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.2 | Archaeplastida | |
| GSVIVT01023591001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
| GSVIVT01034219001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | Archaeplastida | |
| Gb_19269 | No alias | component RPS12 of SSU proteome | 0.12 | Archaeplastida | |
| LOC_Os07g05580.1 | No alias | component RPS12 of SSU proteome | 0.16 | Archaeplastida | |
| LOC_Os07g12650.1 | No alias | component RPS12 of SSU proteome | 0.15 | Archaeplastida | |
| MA_119564g0010 | No alias | no hits & (original description: none) | 0.21 | Archaeplastida | |
| MA_16920g0010 | No alias | component RPS12 of SSU proteome | 0.15 | Archaeplastida | |
| Mp7g11470.1 | No alias | component RPS12 of SSU proteome | 0.24 | Archaeplastida | |
| Pp3c12_3210V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.11 | Archaeplastida | |
| Pp3c16_7980V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.23 | Archaeplastida | |
| Pp3c17_3630V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.13 | Archaeplastida | |
| Solyc01g103800.3.1 | No alias | component RPS12 of SSU proteome | 0.2 | Archaeplastida | |
| Solyc03g083290.4.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Solyc12g042650.2.1 | No alias | component RPS12 of SSU proteome | 0.22 | Archaeplastida | |
| Zm00001e009380_P001 | No alias | component RPS12 of SSU proteome | 0.19 | Archaeplastida | |
| Zm00001e032507_P001 | No alias | component RPS12 of SSU proteome | 0.02 | Archaeplastida | |
| Zm00001e033149_P001 | No alias | component RPS12 of SSU proteome | 0.1 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006465 | signal peptide processing | IEP | Neighborhood |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
| CC | GO:0030008 | TRAPP complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| CC | GO:0099023 | tethering complex | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 29 | 122 |
| No external refs found! |