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  5. Smo442865

Smo442865


Description : RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.ACINUS component


Gene families : OG0002679 (Archaeplastida) Phylogenetic Tree(s): OG0002679_tree ,
OG_05_0002265 (LandPlants) Phylogenetic Tree(s): OG_05_0002265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo442865
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Cre03.g204950 No alias No description available 0.02 Archaeplastida
GSVIVT01008977001 No alias RNA processing.RNA quality control Exon Junction complex... 0.02 Archaeplastida
Mp2g15000.1 No alias component ACINUS of RNA quality control Exon Junction complex 0.02 Archaeplastida
Pp3c9_18590V3.1 No alias SAP domain-containing protein 0.03 Archaeplastida
Solyc04g072670.4.1 No alias component ACINUS of RNA quality control Exon Junction complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003034 SAP_dom 6 38
No external refs found!