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Heatmap: Cluster_181 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.02 -0.75 -0.42 -0.32 0.04 0.15 0.69 0.67 0.47 0.38 -0.15 -0.34 -0.31 -1.32 0.23 -0.5 -0.14 -0.41 -0.15 -2.95 -0.88 -2.41 -0.22 -0.26 -1.15 0.81 1.56 1.62 0.0 0.14 -0.84 -0.81
0.09 0.17 0.16 0.23 0.26 0.2 0.16 0.32 0.13 0.13 0.1 -0.08 -0.23 -0.51 -0.35 0.0 -0.54 -0.77 0.2 -1.11 -3.06 -2.48 -0.36 -0.36 -0.82 1.08 1.2 1.3 -0.28 -0.26 -0.54 -0.49
-0.6 -0.92 -0.42 -0.31 -0.18 0.12 -0.29 0.29 0.22 -0.57 -0.42 -0.82 -0.15 0.63 -1.17 0.17 -0.89 -0.36 -0.09 -6.67 -3.55 -2.28 -1.14 -0.91 -1.16 1.65 2.13 2.04 -0.57 -1.03 -1.22 -0.22
-0.35 0.09 -0.12 0.36 0.54 0.56 0.39 0.53 -0.08 0.36 -0.11 -0.19 0.18 -1.07 -0.37 0.09 -0.89 -1.44 0.47 - - - -0.31 -0.18 -2.65 1.33 1.63 1.14 -0.4 -0.49 -0.69 -0.43
0.05 -0.12 -0.09 0.36 0.73 0.74 0.29 0.86 0.2 0.54 0.14 0.06 -0.78 -1.16 -3.93 -0.71 -2.15 -2.71 -0.7 -3.82 -1.67 -3.9 -0.86 -0.83 -1.09 1.77 2.02 1.65 -2.0 -2.16 -1.44 -0.96
-0.18 -0.11 -0.14 0.21 0.29 0.4 0.43 0.4 0.22 0.06 -0.23 -0.4 -0.18 -0.13 0.31 -0.05 -0.13 -0.25 0.33 -3.47 -0.68 -2.68 -0.16 -0.14 -0.33 0.59 1.04 1.09 -0.25 -0.19 -0.71 -0.7
0.02 0.09 -0.1 0.27 0.56 0.49 0.3 0.56 0.26 0.2 0.02 -0.12 -0.39 -0.76 0.26 -0.08 -0.22 -1.0 0.34 - -6.57 - -0.21 -0.27 -2.56 1.09 1.08 1.27 0.09 0.14 -0.86 -0.82
-0.17 -0.07 -0.23 -0.03 0.23 0.19 0.38 0.49 0.21 0.18 0.07 -0.02 -0.67 -0.09 0.09 -0.37 -0.79 -0.87 0.22 -3.1 -3.23 -0.67 -0.56 -0.49 -1.67 0.86 1.43 1.35 -0.47 -0.36 0.02 0.2
-0.32 -0.46 -0.41 -0.21 0.14 0.16 0.23 0.3 0.22 0.07 0.02 -0.33 -0.52 -0.31 -0.38 -0.18 0.03 -0.08 -0.07 -1.01 -0.78 -2.47 -0.01 -0.15 -0.28 0.7 1.18 1.4 0.07 0.1 -0.4 -0.44
-0.2 0.03 -0.02 0.22 0.39 0.45 0.43 0.46 0.2 0.06 -0.02 -0.22 -0.76 -0.6 -0.81 -0.58 -0.48 -0.97 -0.4 -3.31 -0.7 -5.82 -0.48 -0.56 0.06 0.78 1.74 1.55 -0.59 -0.51 -0.45 -0.36
-0.14 0.14 0.21 0.57 0.71 0.75 0.46 0.53 0.17 0.01 -0.29 -0.4 -0.28 -0.21 0.33 -0.21 -0.47 -1.92 -0.24 -1.49 -2.14 -3.07 -0.41 -0.55 -0.82 1.1 1.33 1.29 -0.82 -0.72 -1.08 -1.25
-0.11 0.09 -0.01 0.23 0.3 0.32 0.48 0.37 0.17 0.12 0.06 -0.1 -0.07 -0.72 0.11 0.16 -0.55 -1.03 0.04 -1.58 -2.25 -1.45 -0.4 -0.43 -0.56 0.91 1.22 1.34 -0.44 -0.35 -0.7 -0.84
-0.15 -0.37 -0.12 0.24 0.36 0.25 0.19 0.24 0.04 0.03 -0.35 -0.3 -0.25 -0.45 0.01 0.08 -0.16 -1.03 0.18 -5.28 -0.38 -3.39 -0.44 -0.47 -0.48 0.88 1.55 1.44 -0.18 -0.13 -0.67 -0.66
-0.19 0.1 0.38 0.42 0.53 0.49 -0.15 0.28 0.03 -0.03 0.06 0.0 0.34 -0.32 0.54 -0.04 -1.11 -1.19 -1.2 - -6.3 -6.08 -0.45 -0.28 -1.58 1.31 1.68 1.69 -1.28 -1.21 -1.31 -0.97
-0.04 0.17 0.16 0.18 0.34 0.28 0.3 0.35 0.11 0.12 -0.05 -0.13 -0.06 -0.45 0.11 0.12 -0.24 -0.86 0.3 - - - -0.23 -0.2 -2.29 1.07 1.26 1.39 -0.15 -0.13 -0.7 -0.67
-0.24 -0.23 -0.02 0.01 0.02 -0.03 0.1 0.27 0.26 0.21 0.22 -0.04 0.18 -0.15 -0.18 -0.1 -0.07 -0.17 -0.2 -1.63 -1.42 -1.65 -0.29 -0.43 -1.26 0.57 1.08 1.2 -0.06 -0.05 -0.08 0.28
-0.48 -0.36 0.05 -0.04 -0.04 -0.15 0.35 0.55 0.15 0.44 0.55 0.22 0.92 -1.14 -1.79 -0.73 -0.52 -0.08 -0.51 - -5.25 - 0.01 0.19 0.68 0.75 1.37 1.46 -0.34 -0.54 -1.11 -1.12
0.45 0.06 0.26 -0.14 0.42 0.31 0.16 0.5 0.36 0.33 0.66 0.38 -0.15 -0.28 -0.55 -0.29 -0.78 -1.55 -0.49 -2.64 -4.46 -6.8 -0.46 -0.55 -1.22 0.83 1.23 1.28 -0.27 -0.4 -0.07 -0.09
0.04 -0.22 0.02 0.09 0.17 0.21 0.21 0.24 0.14 0.12 0.12 -0.13 0.42 0.39 0.48 0.03 -0.66 -0.89 -0.08 -1.45 -3.9 -3.96 -0.28 -0.28 -0.75 1.08 1.3 1.15 -0.72 -0.67 -0.65 -0.65
0.12 0.26 -0.02 0.16 0.26 0.39 0.53 0.22 0.03 -0.01 -0.02 -0.26 -0.16 -0.89 0.53 -0.06 -0.73 -0.44 0.09 -3.21 -4.33 -1.96 -0.65 -0.65 -1.31 0.99 1.63 1.56 -0.72 -0.7 -0.86 -0.98
-0.29 -0.91 -1.81 -0.73 0.6 0.39 0.65 0.92 0.37 0.25 0.25 -0.44 -1.78 -2.19 -2.48 -1.51 -2.35 -0.8 -0.6 - - - -0.89 -0.87 -0.66 1.39 2.33 2.44 -0.69 -1.37 -1.26 -1.6
-0.04 0.12 0.27 0.38 0.6 0.56 0.38 0.34 0.1 -0.05 -0.08 -0.3 -0.17 -0.46 0.03 0.04 -0.3 -1.19 0.19 -1.62 -2.34 -2.31 -0.15 -0.31 -0.75 0.64 1.09 1.2 -0.28 -0.2 -0.61 -0.57
0.55 0.6 0.41 0.51 0.43 0.12 0.41 0.55 0.48 0.38 0.26 0.56 -1.38 -1.15 -0.68 -0.64 -1.25 -1.77 -0.25 -4.78 -5.47 - -1.08 -1.25 -2.04 1.0 1.63 1.55 -0.74 -0.68 -0.28 -0.47
0.25 0.25 0.32 0.5 0.66 0.39 0.36 0.59 0.62 0.46 0.42 0.16 -0.2 -0.64 -0.13 -0.06 -0.93 -1.5 -0.62 -6.08 -4.22 -3.29 -0.27 -0.09 -3.57 0.92 1.33 1.13 -0.85 -0.69 -0.92 -0.55
-0.18 -0.31 -0.12 0.07 0.15 0.21 0.28 0.41 0.36 0.24 0.0 -0.2 0.05 -0.27 0.8 -0.33 -0.83 -1.18 -0.39 -1.66 -2.64 -1.76 -0.56 -0.37 -1.61 1.13 1.55 1.39 -0.79 -0.65 -0.41 -0.33
-0.08 0.05 0.17 0.27 0.16 0.21 0.35 0.6 0.25 0.14 0.46 0.11 -0.73 -0.12 0.31 -0.55 -0.23 -0.34 -0.42 -2.84 -1.8 -1.84 -0.23 -0.41 -2.09 0.77 1.25 1.16 -0.42 -0.45 -0.24 -0.24
-0.13 -0.05 -0.37 0.06 0.4 0.12 0.09 0.55 0.44 0.18 0.15 0.02 -0.73 -0.97 -1.07 -0.52 -0.75 -4.02 -0.97 -1.92 -3.1 -0.19 -0.41 -0.38 -0.67 1.71 1.82 1.36 -0.69 -0.83 -0.57 -0.56
-0.04 0.17 0.18 0.14 0.25 0.12 0.04 -0.07 -0.07 -0.07 -0.07 -0.26 -0.1 -0.07 0.26 0.18 -0.42 -0.78 0.14 -0.41 -1.45 -2.49 -0.16 -0.12 -0.45 0.75 1.06 1.13 -0.47 -0.27 -0.26 -0.19
-0.32 -0.23 -0.24 0.02 0.12 0.18 0.4 0.69 0.13 0.12 0.02 -0.17 0.2 -0.6 -2.13 -0.14 -0.49 -0.37 0.16 -6.71 -2.6 -8.4 0.06 0.28 0.25 0.43 1.58 1.61 -0.4 -0.33 -0.73 -0.94
0.34 0.3 0.29 0.34 0.21 0.33 0.25 0.39 0.41 0.32 0.2 0.08 -0.5 -1.11 0.69 -0.43 -0.34 -0.99 0.09 -8.18 -3.07 -2.18 -0.68 -1.04 -3.46 1.12 0.93 1.33 -0.01 -0.14 -0.44 -0.58
0.32 0.25 0.27 0.39 0.52 0.47 0.41 0.19 -0.03 -0.04 -0.11 -0.18 -0.48 -0.33 -0.09 -0.3 -0.13 -0.52 0.11 -3.26 -2.28 -2.31 -0.31 -0.5 -1.03 0.43 1.35 1.37 -0.46 -0.32 -0.46 -0.35
0.22 0.48 0.4 0.33 0.17 0.29 0.09 0.02 0.12 0.06 0.33 -0.15 -0.46 -1.58 0.24 -0.46 -0.35 -0.15 -0.31 -4.31 -7.39 -2.32 -0.27 -0.01 -0.76 0.71 1.5 1.38 -0.52 -0.71 -0.29 -0.29
-0.05 0.33 0.15 0.1 0.51 0.04 0.37 0.2 0.07 0.14 0.16 -0.23 -0.22 -0.4 -0.2 0.22 -0.48 -1.34 0.06 - -5.04 -4.68 -0.23 -0.11 -1.29 1.17 1.45 1.6 -0.32 -0.25 -1.3 -1.12
-0.16 0.05 0.09 -0.04 0.3 0.52 0.51 0.61 0.21 0.33 0.03 -0.09 -0.38 -0.71 -0.99 -0.18 -1.11 -0.84 0.33 -1.4 -2.85 -4.43 -0.89 -0.83 -0.6 0.97 1.66 1.24 -0.85 -0.78 -0.4 0.38
0.04 -0.08 0.04 0.13 0.11 0.16 0.17 0.37 0.33 0.24 0.28 0.02 -0.64 -0.22 0.1 -0.78 -0.55 -0.72 -0.63 -2.95 -2.2 -2.37 -0.54 -0.33 -1.61 0.7 1.64 1.44 -0.65 -0.51 0.1 0.39
-0.09 0.01 -0.08 0.34 0.44 0.35 0.39 0.5 0.43 0.26 0.22 0.02 0.12 -0.66 -0.19 0.14 -0.45 -1.25 -0.05 -1.63 -3.9 -2.66 -0.22 -0.2 -0.88 0.81 1.2 1.22 -0.32 -0.29 -0.81 -0.84
-0.58 -0.0 -0.01 0.32 0.66 0.74 0.44 0.17 -0.32 -0.44 -0.57 -0.78 -0.96 -0.23 -1.14 -0.18 0.15 -0.76 0.31 -3.02 -2.76 -3.14 0.3 0.17 -2.18 0.96 1.5 1.67 -0.04 -0.03 -0.88 -0.97
0.22 0.37 0.38 0.36 0.72 0.69 0.41 0.46 0.17 0.05 -0.08 -0.24 -0.6 -0.41 0.36 -0.13 -0.38 -0.45 -0.03 -1.55 -2.3 -3.71 -0.41 -0.43 -2.53 0.37 1.16 1.31 -0.63 -0.53 -0.59 -0.64
-0.16 -0.21 -0.19 0.05 0.33 0.31 0.29 0.41 0.15 0.06 0.01 -0.42 -0.02 -1.04 0.27 -0.0 -0.46 -0.23 0.11 -4.72 -1.77 -2.34 -0.01 0.13 -0.85 0.97 1.29 1.13 -0.17 -0.13 -0.39 -0.5
-0.32 -0.2 -0.13 0.27 0.56 0.52 0.39 0.48 -0.02 -0.12 -0.26 -0.3 -0.44 -0.38 0.13 -0.18 -0.47 -1.25 -0.14 -1.1 -2.01 -2.47 -0.02 -0.14 -0.54 0.87 1.43 1.42 -0.63 -0.43 -0.55 -0.42
-0.05 -0.2 -0.28 0.15 0.11 0.18 0.14 0.31 0.15 0.07 0.14 -0.12 -0.25 -0.7 0.05 -0.18 -0.37 -1.14 0.14 -1.15 -1.93 -2.13 -0.2 -0.05 0.1 1.07 1.28 1.13 -0.35 -0.22 -0.27 -0.36
0.36 0.08 -0.05 -0.12 0.08 -0.01 0.12 0.3 0.36 0.32 0.47 0.4 -0.37 -0.26 -0.82 -0.04 -0.22 -0.78 0.46 -2.24 -2.35 -3.75 0.08 -0.09 -0.99 0.82 0.86 0.99 -0.0 -0.0 -0.35 -0.19
0.09 0.14 0.16 0.12 0.05 0.22 0.16 0.2 0.06 0.02 -0.04 -0.13 -0.22 -0.22 0.35 -0.1 -0.62 -1.4 -0.03 -1.95 -1.01 -2.56 -0.34 -0.39 -0.43 0.97 1.4 1.39 -0.62 -0.59 -0.44 -0.36
-0.26 -0.02 -0.07 0.13 0.31 0.17 -0.05 -0.02 -0.14 -0.21 -0.29 -0.45 0.18 0.61 0.11 0.14 -0.7 -0.65 -0.09 -4.36 -1.67 -1.41 -0.24 -0.34 -0.55 1.21 1.44 1.5 -0.66 -0.71 -0.72 -0.54
0.15 0.13 0.11 0.17 0.26 0.19 0.16 0.09 0.02 0.13 0.0 -0.01 -0.16 -0.14 0.53 -0.1 -0.63 -0.94 -0.14 -0.19 -1.28 -1.11 -0.56 -0.5 -0.24 0.82 0.97 0.98 -0.63 -0.57 -0.27 -0.19
-0.02 0.03 0.04 0.41 0.55 0.37 0.35 0.53 0.37 0.16 0.09 -0.02 -0.26 -0.08 0.19 -0.1 -0.86 -0.94 -0.18 -2.14 -2.86 -1.99 -0.43 -0.4 -0.64 0.95 1.11 0.8 -0.77 -0.52 -0.17 0.16
0.0 -0.07 -0.05 -0.08 -0.05 0.16 0.08 0.25 0.2 0.01 -0.17 -0.22 -0.19 0.12 0.04 -0.18 -0.62 -0.57 -0.16 -0.94 -0.79 -1.34 -0.24 -0.22 -0.79 0.67 1.42 1.38 -0.69 -0.55 -0.18 -0.01
0.24 0.12 0.15 0.16 0.19 0.13 0.06 0.39 0.32 0.16 0.21 -0.03 -0.79 -0.75 -0.7 -0.36 -0.12 -0.86 0.03 -6.11 -4.76 -5.12 -0.29 -0.31 -0.84 1.11 1.36 1.29 -0.16 -0.22 -0.11 0.3
-0.12 -0.26 -0.18 0.02 0.23 0.06 0.17 0.33 0.28 0.16 0.12 -0.02 -0.69 -1.07 -1.33 -0.39 -0.2 -0.33 0.71 -4.86 -2.3 -4.74 -0.19 -0.27 -1.53 1.27 1.17 1.27 0.18 0.15 0.07 0.14
-0.61 -0.25 -0.05 0.18 0.25 0.36 0.16 0.4 0.16 -0.1 -0.23 -0.54 -0.23 -0.39 -0.48 0.44 -0.27 -1.2 0.74 - -5.59 - -0.33 -0.42 -2.57 1.24 1.43 1.54 -0.1 -0.05 -0.32 -0.17
-0.37 -0.03 0.2 0.27 0.41 0.55 0.12 0.1 -0.32 -0.46 -0.47 -0.73 -0.47 -0.5 0.29 -0.29 -0.35 -0.67 0.08 -2.48 -2.28 -3.72 -0.32 -0.36 -0.97 1.07 1.72 1.83 -0.74 -0.63 -0.54 -0.46
0.25 -0.05 -0.04 0.05 0.1 0.07 0.01 0.36 0.45 0.33 0.39 0.14 -0.23 -0.58 -0.98 -0.36 -0.0 -0.6 0.3 -4.61 -4.32 -5.88 -0.24 -0.37 -2.26 1.23 1.21 1.4 0.22 0.33 -1.0 -0.94
-0.28 -0.24 -0.17 0.15 0.28 0.34 0.32 0.48 0.3 0.04 -0.08 -0.19 -0.45 -0.65 -0.09 -0.32 -0.35 -1.23 -0.19 -1.8 -2.56 -1.73 -0.38 -0.3 0.67 0.94 1.34 1.4 -0.38 -0.28 -0.54 -0.64
-0.08 0.03 0.17 0.33 0.25 0.31 0.12 0.13 -0.05 -0.04 0.05 -0.2 -0.3 -0.39 -0.11 -0.11 -0.39 -1.04 -0.08 -1.94 -3.26 -1.14 -0.32 -0.25 -0.61 1.12 1.37 1.46 -0.38 -0.35 -0.58 -0.52
0.01 0.19 0.23 0.3 0.35 0.27 0.21 0.29 -0.23 -0.01 -0.1 -0.35 -0.62 -0.44 -0.19 -0.1 0.04 -0.46 0.37 -1.73 -1.47 -3.21 0.17 -0.1 -0.52 0.73 0.98 1.18 -0.16 -0.1 -0.4 -0.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.