AMTR_s00019p00086450 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.64

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00019p00086450
Cluster	HCCA: Cluster_166

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00028460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00101p00022740	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G51190	PLT2	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G79700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT3G20840	PLT1	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G10510	PLT3, AIL6	AINTEGUMENTA-like 6	0.04	Archaeplastida
AT5G17430	BBM	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Cre08.g385350	No alias	No description available	0.01	Archaeplastida
GSVIVT01016352001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01016764001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_18139	No alias	transcription factor (AP2)	0.03	Archaeplastida
Gb_33988	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os01g59780.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os01g67410.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os02g40070.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os03g07940.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os03g12950.1	No alias	no description available(sp\|q84z02\|crl5_orysj : 102.0)	0.03	Archaeplastida
LOC_Os03g19900.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os04g42570.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os06g05340.1	No alias	transcription factor (AP2). RAM1-dependent transcription...	0.04	Archaeplastida
LOC_Os06g43220.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os06g44750.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os07g03250.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os07g13170.2	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os08g34360.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os11g19060.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_113625g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_196219g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_31722g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_8090186g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_95471g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_98095g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
Mp7g13270.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Pp3c23_13360V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c9_25570V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g096860.3.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Solyc03g044300.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc04g049800.3.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc06g075510.4.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc11g008560.2.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc11g061750.2.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc11g072600.3.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Zm00001e006752_P001	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e015104_P001	No alias	transcription factor (AP2)	0.04	Archaeplastida
Zm00001e018951_P001	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e038652_P002	No alias	transcription factor (AP2)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Neighborhood
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Neighborhood
BP	GO:0006098	pentose-phosphate shunt	IEP	Neighborhood
BP	GO:0006739	NADP metabolic process	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008047	enzyme activator activity	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
MF	GO:0019211	phosphatase activator activity	IEP	Neighborhood
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	148	199
IPR001471	AP2/ERF_dom	46	106

External Links

No external refs found!

AMTR_s00019p00086450 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation