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  5. Smo444748

Smo444748


Description : Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana


Gene families : OG0000981 (Archaeplastida) Phylogenetic Tree(s): OG0000981_tree ,
OG_05_0001237 (LandPlants) Phylogenetic Tree(s): OG_05_0001237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo444748
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g58810.1 No alias Probable CCR4-associated factor 1 homolog 11... 0.06 Archaeplastida
Smo84624 No alias Probable CCR4-associated factor 1 homolog 7... 0.03 Archaeplastida
Solyc06g074030.1.1 No alias deadenylase component CAF1 of CCR4-NOT complex 0.03 Archaeplastida
Solyc11g068770.1.1 No alias deadenylase component CAF1 of CCR4-NOT complex 0.03 Archaeplastida
Zm00001e034143_P002 No alias Probable CCR4-associated factor 1 homolog 7... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR006941 RNase_CAF1 15 136
No external refs found!