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Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL11 component
Gene families : OG0001738 (Archaeplastida) Phylogenetic Tree(s): OG0001738_tree ,
OG_05_0001636 (LandPlants) Phylogenetic Tree(s): OG_05_0001636_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo444767 | |
| Cluster | HCCA: Cluster_180 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00200160 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | Archaeplastida | |
| AMTR_s00025p00203150 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | Archaeplastida | |
| AT2G42740 | RPL16A | ribosomal protein large subunit 16A | 0.1 | Archaeplastida | |
| AT3G58700 | No alias | Ribosomal L5P family protein | 0.13 | Archaeplastida | |
| AT4G18730 | RPL16B | ribosomal protein L16B | 0.29 | Archaeplastida | |
| AT5G45775 | No alias | Ribosomal L5P family protein | 0.28 | Archaeplastida | |
| Cpa|evm.model.tig00020610.38 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | Archaeplastida | |
| Cre01.g027000 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.23 | Archaeplastida | |
| GSVIVT01020743001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.2 | Archaeplastida | |
| GSVIVT01021244001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.19 | Archaeplastida | |
| Gb_08546 | No alias | component RPL11 of LSU proteome component | 0.09 | Archaeplastida | |
| LOC_Os01g10820.1 | No alias | component RPL11 of LSU proteome component | 0.18 | Archaeplastida | |
| LOC_Os02g14059.1 | No alias | component RPL11 of LSU proteome component | 0.05 | Archaeplastida | |
| LOC_Os05g11710.1 | No alias | component RPL11 of LSU proteome component | 0.24 | Archaeplastida | |
| LOC_Os06g35730.1 | No alias | component RPL11 of LSU proteome component | 0.23 | Archaeplastida | |
| MA_74060g0010 | No alias | component RPL11 of LSU proteome component | 0.08 | Archaeplastida | |
| MA_86694g0010 | No alias | component RPL11 of LSU proteome component | 0.24 | Archaeplastida | |
| Mp2g24740.1 | No alias | component RPL11 of LSU proteome component | 0.29 | Archaeplastida | |
| Mp6g18870.1 | No alias | component RPL11 of LSU proteome component | 0.06 | Archaeplastida | |
| Pp3c11_8070V3.1 | No alias | ribosomal protein L16B | 0.2 | Archaeplastida | |
| Pp3c1_7710V3.1 | No alias | ribosomal protein L16B | 0.25 | Archaeplastida | |
| Pp3c27_2260V3.1 | No alias | Ribosomal L5P family protein | 0.24 | Archaeplastida | |
| Pp3c2_33280V3.1 | No alias | ribosomal protein L16B | 0.05 | Archaeplastida | |
| Pp3c5_3870V3.1 | No alias | Ribosomal L5P family protein | 0.16 | Archaeplastida | |
| Pp3c7_20160V3.1 | No alias | ribosomal protein large subunit 16A | 0.27 | Archaeplastida | |
| Solyc02g086240.3.1 | No alias | component RPL11 of LSU proteome component | 0.26 | Archaeplastida | |
| Solyc07g055230.4.1 | No alias | component RPL11 of LSU proteome component | 0.19 | Archaeplastida | |
| Solyc10g007980.3.1 | No alias | component RPL11 of LSU proteome component | 0.21 | Archaeplastida | |
| Solyc12g010930.2.1 | No alias | component RPL11 of LSU proteome component | 0.27 | Archaeplastida | |
| Zm00001e014363_P001 | No alias | no hits & (original description: none) | 0.19 | Archaeplastida | |
| Zm00001e024913_P001 | No alias | component RPL11 of LSU proteome component | 0.26 | Archaeplastida | |
| Zm00001e026886_P003 | No alias | component RPL11 of LSU proteome component | 0.15 | Archaeplastida | |
| Zm00001e037255_P001 | No alias | component RPL11 of LSU proteome component | 0.18 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0003713 | transcription coactivator activity | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0030008 | TRAPP complex | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0099023 | tethering complex | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR031309 | Ribosomal_L5_C | 63 | 161 |
| No external refs found! |