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  5. Smo446561

Smo446561


Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit


Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree ,
OG_05_0005346 (LandPlants) Phylogenetic Tree(s): OG_05_0005346_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo446561
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g57040.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 Archaeplastida
LOC_Os10g22330.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 Archaeplastida
Mp1g27490.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
Smo113878 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 Archaeplastida
Solyc04g081410.3.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.03 Archaeplastida
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 12 143
No external refs found!