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  5. AT1G34310

AT1G34310 (ARF12)


Aliases : ARF12

Description : auxin response factor 12


Gene families : OG0012178 (Archaeplastida) Phylogenetic Tree(s): OG0012178_tree ,
OG_05_0012108 (LandPlants) Phylogenetic Tree(s): OG_05_0012108_tree ,
OG_06_0011568 (SeedPlants) Phylogenetic Tree(s): OG_06_0011568_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G34310
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G34390 ARF22 auxin response factor 22 0.04 Archaeplastida
AT1G43950 ARF23 auxin response factor 23 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Neighborhood
MF GO:0004150 dihydroneopterin aldolase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0009008 DNA-methyltransferase activity IEP Neighborhood
BP GO:0009559 embryo sac central cell differentiation IEP Neighborhood
MF GO:0009824 AMP dimethylallyltransferase activity IEP Neighborhood
MF GO:0015386 potassium:proton antiporter activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0022821 potassium ion antiporter activity IEP Neighborhood
CC GO:0043076 megasporocyte nucleus IEP Neighborhood
CC GO:0043078 polar nucleus IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0052622 ATP dimethylallyltransferase activity IEP Neighborhood
MF GO:0052623 ADP dimethylallyltransferase activity IEP Neighborhood
BP GO:0060688 regulation of morphogenesis of a branching structure IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1900618 regulation of shoot system morphogenesis IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1905428 regulation of plant organ formation IEP Neighborhood
BP GO:2000032 regulation of secondary shoot formation IEP Neighborhood
InterPro domains Description Start Stop
IPR010525 Auxin_resp 252 330
IPR033389 AUX/IAA_dom 556 591
IPR033389 AUX/IAA_dom 503 547
IPR003340 B3_DNA-bd 126 227
No external refs found!