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Description : RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease
Gene families : OG0000221 (Archaeplastida) Phylogenetic Tree(s): OG0000221_tree ,
OG_05_0000940 (LandPlants) Phylogenetic Tree(s): OG_05_0000940_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo448444 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G03300 | ATDCL2, DCL2 | dicer-like 2 | 0.03 | Archaeplastida | |
| AT5G20320 | DCL4, ATDCL4 | dicer-like 4 | 0.03 | Archaeplastida | |
| AT5G45150 | RTL3 | RNAse THREE-like protein 3 | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00000741.30 | No alias | No description available | 0.02 | Archaeplastida | |
| LOC_Os01g68120.1 | No alias | endoribonuclease (DCL3) | 0.02 | Archaeplastida | |
| MA_8664686g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Solyc06g048960.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e018890_P004 | No alias | endoribonuclease (DCL3) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| MF | GO:0008658 | penicillin binding | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Neighborhood |
| MF | GO:0031406 | carboxylic acid binding | IEP | Neighborhood |
| CC | GO:0031414 | N-terminal protein acetyltransferase complex | IEP | Neighborhood |
| CC | GO:0031417 | NatC complex | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| MF | GO:0033293 | monocarboxylic acid binding | IEP | Neighborhood |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043177 | organic acid binding | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| MF | GO:1901681 | sulfur compound binding | IEP | Neighborhood |
| CC | GO:1902493 | acetyltransferase complex | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001650 | Helicase_C | 719 | 819 |
| No external refs found! |