Coexpression cluster: Cluster_36 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046914 transition metal ion binding 8.89% (8/90) 3.13 4e-06 0.00057
GO:0008270 zinc ion binding 7.78% (7/90) 3.13 1.6e-05 0.001158
GO:0043167 ion binding 14.44% (13/90) 1.92 3.5e-05 0.001718
GO:0043169 cation binding 8.89% (8/90) 2.45 0.000111 0.003272
GO:0046872 metal ion binding 8.89% (8/90) 2.47 0.000101 0.003717
GO:0006418 tRNA aminoacylation for protein translation 3.33% (3/90) 4.29 0.000485 0.010187
GO:0043039 tRNA aminoacylation 3.33% (3/90) 4.14 0.000652 0.010657
GO:0043038 amino acid activation 3.33% (3/90) 4.14 0.000652 0.010657
GO:0016070 RNA metabolic process 5.56% (5/90) 2.98 0.000442 0.010827
GO:0090304 nucleic acid metabolic process 5.56% (5/90) 2.67 0.001147 0.015328
GO:0006399 tRNA metabolic process 3.33% (3/90) 3.89 0.001088 0.015998
GO:0006520 cellular amino acid metabolic process 3.33% (3/90) 3.68 0.001674 0.020505
GO:0034660 ncRNA metabolic process 3.33% (3/90) 3.58 0.002028 0.022932
GO:0008658 penicillin binding 1.11% (1/90) 7.95 0.004039 0.024736
GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 1.11% (1/90) 7.95 0.004039 0.024736
GO:0008409 5'-3' exonuclease activity 1.11% (1/90) 7.95 0.004039 0.024736
GO:0008297 single-stranded DNA exodeoxyribonuclease activity 1.11% (1/90) 7.95 0.004039 0.024736
GO:0033293 monocarboxylic acid binding 1.11% (1/90) 7.95 0.004039 0.024736
GO:0004536 deoxyribonuclease activity 1.11% (1/90) 7.95 0.004039 0.024736
GO:0004529 exodeoxyribonuclease activity 1.11% (1/90) 7.95 0.004039 0.024736
GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity 1.11% (1/90) 7.95 0.004039 0.024736
GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters 1.11% (1/90) 7.95 0.004039 0.024736
GO:0035312 5'-3' exodeoxyribonuclease activity 1.11% (1/90) 7.95 0.004039 0.024736
GO:0006139 nucleobase-containing compound metabolic process 5.56% (5/90) 2.23 0.004356 0.025615
GO:0004527 exonuclease activity 1.11% (1/90) 6.95 0.008061 0.032916
GO:0050897 cobalt ion binding 1.11% (1/90) 6.95 0.008061 0.032916
GO:0000151 ubiquitin ligase complex 1.11% (1/90) 6.95 0.008061 0.032916
GO:0000152 nuclear ubiquitin ligase complex 1.11% (1/90) 6.95 0.008061 0.032916
GO:0005680 anaphase-promoting complex 1.11% (1/90) 6.95 0.008061 0.032916
GO:0031461 cullin-RING ubiquitin ligase complex 1.11% (1/90) 6.95 0.008061 0.032916
GO:0006725 cellular aromatic compound metabolic process 5.56% (5/90) 2.11 0.006174 0.034908
GO:0034641 cellular nitrogen compound metabolic process 5.56% (5/90) 1.96 0.009392 0.037313
GO:0046483 heterocycle metabolic process 5.56% (5/90) 2.06 0.00711 0.03733
GO:1901360 organic cyclic compound metabolic process 5.56% (5/90) 2.05 0.00741 0.037559
GO:0004518 nuclease activity 2.22% (2/90) 4.0 0.006951 0.037842
GO:0005488 binding 21.11% (19/90) 0.84 0.007996 0.039179
GO:0006082 organic acid metabolic process 3.33% (3/90) 2.72 0.010833 0.039813
GO:0043436 oxoacid metabolic process 3.33% (3/90) 2.73 0.010576 0.039865
GO:0019752 carboxylic acid metabolic process 3.33% (3/90) 2.74 0.010323 0.039933
GO:0140097 catalytic activity, acting on DNA 2.22% (2/90) 4.43 0.003862 0.040548
GO:0031406 carboxylic acid binding 1.11% (1/90) 6.37 0.012067 0.042236
GO:0043177 organic acid binding 1.11% (1/90) 6.37 0.012067 0.042236
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_80 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_101 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_203 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_220 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_240 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_257 0.038 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_17 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_52 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_122 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_185 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_228 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_147 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_223 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_256 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_264 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_180 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.043 Archaeplastida Compare
Zea mays HCCA Cluster_283 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_85 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_93 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_372 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_388 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_409 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_81 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_168 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_180 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_310 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_83 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_108 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_121 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_185 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_160 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_206 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_196 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_249 0.029 Archaeplastida Compare
Sequences (90) (download table)

InterPro Domains

GO Terms

Family Terms