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  5. Smo51483

Smo51483


Description : Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo51483
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT5G59200 OTP80 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
GSVIVT01015461001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
LOC_Os01g19380.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
LOC_Os12g36620.1 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_20168g0010 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.02 Archaeplastida
MA_20782g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
MA_68707g0010 No alias RNA editing factor (MEF1) 0.02 Archaeplastida
Solyc01g007850.2.1 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 196 243
No external refs found!