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  4. Sequence
  5. Smo54466

Smo54466


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0003199 (Archaeplastida) Phylogenetic Tree(s): OG0003199_tree ,
OG_05_0002654 (LandPlants) Phylogenetic Tree(s): OG_05_0002654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo54466
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00159330 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT2G35860 FLA16 FASCICLIN-like arabinogalactan protein 16 precursor 0.1 Archaeplastida
AT3G11700 FLA18 FASCICLIN-like arabinogalactan protein 18 precursor 0.05 Archaeplastida
AT3G52370 FLA15 FASCICLIN-like arabinogalactan protein 15 precursor 0.03 Archaeplastida
AT5G06390 FLA17 FASCICLIN-like arabinogalactan protein 17 precursor 0.05 Archaeplastida
GSVIVT01022545001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.1 Archaeplastida
GSVIVT01022548001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
Gb_31981 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
Gb_37149 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
Gb_40445 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
LOC_Os07g06680.1 No alias fasciclin-type arabinogalactan protein 0.09 Archaeplastida
MA_216501g0010 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
MA_28601g0010 No alias Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis... 0.02 Archaeplastida
MA_28601g0020 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
MA_43595g0010 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
Pp3c16_8540V3.1 No alias FASCICLIN-like arabinogalactan protein 17 precursor 0.06 Archaeplastida
Pp3c25_5850V3.1 No alias FASCICLIN-like arabinogalactan protein 17 precursor 0.02 Archaeplastida
Solyc10g081720.2.1 No alias fasciclin-type arabinogalactan protein 0.14 Archaeplastida
Zm00001e005932_P001 No alias fasciclin-type arabinogalactan protein 0.09 Archaeplastida
Zm00001e011897_P001 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 267 334
No external refs found!