AMTR_s00019p00182440 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.193

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0012823 (LandPlants) Phylogenetic Tree(s): OG_05_0012823_tree ,
OG_06_0012818 (SeedPlants) Phylogenetic Tree(s): OG_06_0012818_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00019p00182440
Cluster	HCCA: Cluster_175

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00140120	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00019p00178550	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00019p00179820	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00021p00176450	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AT2G24710	GLR2.3, ATGLR2.3	glutamate receptor 2.3	0.03	Archaeplastida
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.03	Archaeplastida
AT2G29100	ATGLR2.9, GLR2.9	glutamate receptor 2.9	0.04	Archaeplastida
AT2G29110	GLR2.8, ATGLR2.8	glutamate receptor 2.8	0.03	Archaeplastida
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.03	Archaeplastida
AT2G32390	ATGLR3.5, GLR6, GLR3.5	glutamate receptor 3.5	0.03	Archaeplastida
AT3G04110	ATGLR1.1, GLR1.1, GLR1	glutamate receptor 1.1	0.03	Archaeplastida
AT4G31710	GLR2.4, ATGLR2.4	glutamate receptor 2.4	0.03	Archaeplastida
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.04	Archaeplastida
AT5G11210	GLR2.5, ATGLR2.5	glutamate receptor 2.5	0.06	Archaeplastida
AT5G27100	GLR2.1, ATGLR2.1	glutamate receptor 2.1	0.03	Archaeplastida
AT5G48400	ATGLR1.2, GLR1.2	Glutamate receptor family protein	0.08	Archaeplastida
AT5G48410	ATGLR1.3, GLR1.3	glutamate receptor 1.3	0.05	Archaeplastida
GSVIVT01014244001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
GSVIVT01022297001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01029195001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01029198001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
GSVIVT01030602001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.05	Archaeplastida
GSVIVT01033121001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
GSVIVT01033137001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
GSVIVT01033150001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
GSVIVT01033160001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
GSVIVT01033163001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
Gb_16129	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Gb_20613	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Gb_27767	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Gb_28362	No alias	ligand-gated cation channel (GLR)	0.05	Archaeplastida
Gb_28364	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Gb_39752	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Gb_39753	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
LOC_Os02g54640.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
LOC_Os06g08930.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
LOC_Os07g01310.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
LOC_Os09g26144.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_10426811g0010	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
MA_10427025g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_10428186g0020	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_10429132g0010	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
MA_10430853g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_10434521g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_339780g0010	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
MA_43501g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_46902g0010	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
MA_6222576g0010	No alias	ligand-gated cation channel (GLR)	0.06	Archaeplastida
MA_88153g0010	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
MA_958834g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_9796468g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_9896648g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp1g01040.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Solyc02g082480.3.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Solyc04g078860.4.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Solyc06g063180.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc06g063190.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc06g063200.2.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc06g063210.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc07g052390.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc07g052400.3.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Solyc08g006500.4.1	No alias	ligand-gated cation channel (GLR)	0.05	Archaeplastida
Zm00001e007127_P002	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Zm00001e009847_P001	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Zm00001e013023_P001	No alias	ligand-gated cation channel (GLR)	0.05	Archaeplastida
Zm00001e016082_P001	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	IEA	Interproscan
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
MF	GO:0005231	excitatory extracellular ligand-gated ion channel activity	None	Extended
MF	GO:0005234	extracellularly glutamate-gated ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	IEA	Interproscan
MF	GO:0008066	glutamate receptor activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0030288	outer membrane-bounded periplasmic space	IEA	Interproscan
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
CC	GO:0042597	periplasmic space	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004096	catalase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
MF	GO:1901567	fatty acid derivative binding	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	40	188
IPR001320	Iontro_rcpt	17	218

External Links

No external refs found!

AMTR_s00019p00182440 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation