1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo67484

Smo67484


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS2 component


Gene families : OG0001651 (Archaeplastida) Phylogenetic Tree(s): OG0001651_tree ,
OG_05_0001448 (LandPlants) Phylogenetic Tree(s): OG_05_0001448_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo67484
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00212950 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
AT1G58380 XW6 Ribosomal protein S5 family protein 0.02 Archaeplastida
AT1G58684 No alias Ribosomal protein S5 family protein 0.07 Archaeplastida
AT1G58983 No alias Ribosomal protein S5 family protein 0.07 Archaeplastida
AT1G59359 No alias Ribosomal protein S5 family protein 0.07 Archaeplastida
AT2G41840 No alias Ribosomal protein S5 family protein 0.19 Archaeplastida
AT3G57490 No alias Ribosomal protein S5 family protein 0.02 Archaeplastida
Cpa|evm.model.tig00020961.135 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Cre01.g039250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01033299001 No alias 40S ribosomal protein S2-4 OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_04606 No alias component RPS2 of SSU proteome 0.02 Archaeplastida
Gb_04608 No alias component RPS2 of SSU proteome 0.09 Archaeplastida
Gb_04609 No alias component RPS2 of SSU proteome 0.07 Archaeplastida
LOC_Os03g59310.1 No alias component RPS2 of SSU proteome 0.15 Archaeplastida
LOC_Os07g10660.1 No alias component RPS2 of SSU proteome 0.06 Archaeplastida
MA_158470g0010 No alias component RPS2 of SSU proteome 0.1 Archaeplastida
Mp5g15970.1 No alias component RPS2 of SSU proteome 0.22 Archaeplastida
Pp3c20_18740V3.1 No alias Ribosomal protein S5 family protein 0.13 Archaeplastida
Pp3c23_8410V3.1 No alias Ribosomal protein S5 family protein 0.12 Archaeplastida
Pp3c24_5780V3.1 No alias Ribosomal protein S5 family protein 0.19 Archaeplastida
Solyc04g063290.3.1 No alias component RPS2 of SSU proteome 0.2 Archaeplastida
Solyc04g074300.3.1 No alias component RPS2 of SSU proteome 0.22 Archaeplastida
Zm00001e006090_P001 No alias component RPS2 of SSU proteome 0.09 Archaeplastida
Zm00001e011816_P001 No alias component RPS2 of SSU proteome 0.09 Archaeplastida
Zm00001e033091_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 174 245
No external refs found!