1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00019p00199860

AMTR_s00019p00199860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.232

Description : Pathogenesis-related protein PR-1 OS=Medicago truncatula


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree ,
OG_06_0000073 (SeedPlants) Phylogenetic Tree(s): OG_06_0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00199860
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.05 Archaeplastida
AMTR_s00012p00263970 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00022p00231670 evm_27.TU.AmTr_v1... Pathogenesis-related protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G50060 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
AT2G14580 PRB1, ATPRB1 basic pathogenesis-related protein 1 0.04 Archaeplastida
AT2G19990 PR-1-LIKE pathogenesis-related protein-1-like 0.03 Archaeplastida
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.09 Archaeplastida
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 Archaeplastida
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.07 Archaeplastida
AT5G57625 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.09 Archaeplastida
Cre11.g467672 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum 0.01 Archaeplastida
GSVIVT01036993001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.05 Archaeplastida
GSVIVT01037011001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 Archaeplastida
Gb_01098 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 160.0) 0.02 Archaeplastida
LOC_Os01g28500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida
LOC_Os02g54570.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.07 Archaeplastida
LOC_Os04g22210.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.05 Archaeplastida
LOC_Os07g03368.1 No alias Basic form of pathogenesis-related protein 1... 0.03 Archaeplastida
LOC_Os07g03620.1 No alias Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.03 Archaeplastida
LOC_Os07g03690.1 No alias Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.07 Archaeplastida
MA_102795g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 Archaeplastida
MA_10356677g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_10392069g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
MA_171461g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_175771g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_178424g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
MA_300767g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 Archaeplastida
MA_54271g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_66540g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.05 Archaeplastida
MA_77819g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
MA_85698g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_96764g0010 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 146.0) 0.04 Archaeplastida
Mp2g15990.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 Archaeplastida
Mp3g14100.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g14110.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g14130.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g21890.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 Archaeplastida
Mp5g12510.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.04 Archaeplastida
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.03 Archaeplastida
Mp6g06340.1 No alias Basic form of pathogenesis-related protein 1... 0.02 Archaeplastida
Mp6g06410.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 Archaeplastida
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
Mp7g13960.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 Archaeplastida
MpVg01220.1 No alias No annotation 0.02 Archaeplastida
Pp3c11_1180V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
Pp3c17_17400V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
Pp3c25_120V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
Pp3c5_14360V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
Smo101100 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare 0.02 Archaeplastida
Smo101466 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.06 Archaeplastida
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
Solyc01g106640.2.1 No alias Basic form of pathogenesis-related protein 1... 0.07 Archaeplastida
Solyc09g007010.1.1 No alias Pathogenesis-related leaf protein 4 OS=Solanum... 0.03 Archaeplastida
Zm00001e002028_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.04 Archaeplastida
Zm00001e008453_P001 No alias Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.08 Archaeplastida
Zm00001e016073_P001 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 Archaeplastida
Zm00001e016075_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.08 Archaeplastida
Zm00001e023732_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
Zm00001e032756_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
Zm00001e032757_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.04 Archaeplastida
Zm00001e033272_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 55 170
No external refs found!