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  5. Smo7113

Smo7113


Description : Chromatin organisation.histones.H2B-type histone


Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree ,
OG_05_0106049 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo7113
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264900 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre06.g271376 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre06.g274250 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre06.g276550 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre12.g504700 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre12.g506200 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre13.g570050 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre17.g709150 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre17.g710450 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre17.g711750 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre17.g713450 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre17.g714050 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Gb_25549 No alias histone (H2B) 0.02 Archaeplastida
Gb_32754 No alias histone (H2B) 0.02 Archaeplastida
Gb_41617 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os05g49860.1 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os08g38300.1 No alias histone (H2B) 0.02 Archaeplastida
Pp3c14_21050V3.1 No alias Histone superfamily protein 0.01 Archaeplastida
Solyc12g011455.1.1 No alias histone (H2B) 0.02 Archaeplastida
Solyc12g013510.1.1 No alias histone (H2B) 0.01 Archaeplastida
Zm00001e010906_P002 No alias histone (H2B) 0.01 Archaeplastida
Zm00001e023342_P001 No alias histone (H2B) 0.01 Archaeplastida
Zm00001e038466_P001 No alias histone (H2B) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0098519 nucleotide phosphatase activity, acting on free nucleotides IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 4 75
No external refs found!