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  5. Smo73858

Smo73858


Description : High mobility group B protein 6 OS=Arabidopsis thaliana


Gene families : OG0002362 (Archaeplastida) Phylogenetic Tree(s): OG0002362_tree ,
OG_05_0006706 (LandPlants) Phylogenetic Tree(s): OG_05_0006706_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo73858
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00093p00057150 evm_27.TU.AmTr_v1... High mobility group B protein 6 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT4G11080 No alias HMG (high mobility group) box protein 0.03 Archaeplastida
AT4G23800 No alias HMG (high mobility group) box protein 0.05 Archaeplastida
GSVIVT01019504001 No alias High mobility group B protein 13 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_00374 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os02g15810.1 No alias High mobility group B protein 13 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_783123g0010 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp2g12330.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Pp3c11_8530V3.1 No alias HMG (high mobility group) box protein 0.06 Archaeplastida
Pp3c7_20570V3.1 No alias HMG (high mobility group) box protein 0.05 Archaeplastida
Zm00001e014266_P001 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 250 316
No external refs found!