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Description : 40S ribosomal protein S9-1 OS=Arabidopsis thaliana
Gene families : OG0001616 (Archaeplastida) Phylogenetic Tree(s): OG0001616_tree ,
OG_05_0001469 (LandPlants) Phylogenetic Tree(s): OG_05_0001469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo74302 | |
| Cluster | HCCA: Cluster_180 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G15200 | No alias | Ribosomal protein S4 | 0.19 | Archaeplastida | |
| Cpa|evm.model.tig00000826.24 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
| Cre08.g359750 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.13 | Archaeplastida | |
| GSVIVT01008028001 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.11 | Archaeplastida | |
| GSVIVT01011384001 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.13 | Archaeplastida | |
| GSVIVT01020020001 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| Gb_41315 | No alias | component RPS9 of SSU proteome | 0.09 | Archaeplastida | |
| LOC_Os03g05980.1 | No alias | component RPS9 of SSU proteome | 0.15 | Archaeplastida | |
| LOC_Os11g38959.1 | No alias | component RPS9 of SSU proteome | 0.15 | Archaeplastida | |
| MA_10429805g0030 | No alias | component RPS9 of SSU proteome | 0.11 | Archaeplastida | |
| MA_10431745g0020 | No alias | component RPS9 of SSU proteome | 0.08 | Archaeplastida | |
| Mp3g00520.1 | No alias | component RPS9 of SSU proteome | 0.17 | Archaeplastida | |
| Mp6g10930.1 | No alias | component RPS9 of SSU proteome | 0.17 | Archaeplastida | |
| Pp3c12_9190V3.1 | No alias | Ribosomal protein S4 | 0.13 | Archaeplastida | |
| Pp3c13_19780V3.1 | No alias | Ribosomal protein S4 | 0.14 | Archaeplastida | |
| Pp3c27_1920V3.1 | No alias | Ribosomal protein S4 | 0.02 | Archaeplastida | |
| Pp3c3_23720V3.1 | No alias | Ribosomal protein S4 | 0.13 | Archaeplastida | |
| Pp3c4_15290V3.1 | No alias | Ribosomal protein S4 | 0.12 | Archaeplastida | |
| Pp3c6_17680V3.1 | No alias | Ribosomal protein S4 | 0.08 | Archaeplastida | |
| Solyc01g010540.3.1 | No alias | component RPS9 of SSU proteome | 0.12 | Archaeplastida | |
| Solyc01g010580.3.1 | No alias | component RPS9 of SSU proteome | 0.08 | Archaeplastida | |
| Solyc04g005680.4.1 | No alias | component RPS9 of SSU proteome | 0.16 | Archaeplastida | |
| Solyc05g007250.3.1 | No alias | component RPS9 of SSU proteome | 0.2 | Archaeplastida | |
| Zm00001e010819_P002 | No alias | component RPS9 of SSU proteome | 0.17 | Archaeplastida | |
| Zm00001e018345_P001 | No alias | component RPS9 of SSU proteome | 0.12 | Archaeplastida | |
| Zm00001e037961_P002 | No alias | component RPS9 of SSU proteome | 0.1 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005622 | intracellular | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006465 | signal peptide processing | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| CC | GO:0030008 | TRAPP complex | IEP | Neighborhood |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
| CC | GO:0099023 | tethering complex | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001912 | Ribosomal_S4/S9_N | 12 | 64 |
| No external refs found! |