Smo74892

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000418 (LandPlants) Phylogenetic Tree(s): OG_05_0000418_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo74892
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AMTR_s00045p00108620	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AT1G02520	PGP11	P-glycoprotein 11	0.03	Archaeplastida
AT1G02530	PGP12	P-glycoprotein 12	0.02	Archaeplastida
Gb_07563	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_10211	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_10215	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_33057	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_33058	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_36497	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os04g38570.1	No alias	auxin efflux transporter (ABCB19)	0.03	Archaeplastida
MA_636449g0010	No alias	subfamily ABCB transporter	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	485	633

External Links

No external refs found!