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Description : DNA damage response.DNA repair mechanisms.base excision repair (BER).formamidopyrimidine-DNA glycosylase (FPG1)
Gene families : OG0003806 (Archaeplastida) Phylogenetic Tree(s): OG0003806_tree ,
OG_05_0004351 (LandPlants) Phylogenetic Tree(s): OG_05_0004351_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo75016 | |
| Cluster | HCCA: Cluster_84 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01017379001 | No alias | DNA damage response.DNA repair mechanisms.base excision... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
| MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005534 | galactose binding | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016151 | nickel cation binding | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
| MF | GO:0048029 | monosaccharide binding | IEP | Neighborhood |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR015886 | DNA_glyclase/AP_lyase_DNA-bd | 145 | 231 |
| No external refs found! |