AMTR_s00019p00225230 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.292

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00019p00225230
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00216470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G54990	SMZ	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G65510	AIL7	AINTEGUMENTA-like 7	0.03	Archaeplastida
GSVIVT01002536001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01016764001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01020066001	No alias	External stimuli response.biotic...	0.03	Archaeplastida
GSVIVT01023697001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01027345001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_00766	No alias	transcription factor (AP2)	0.02	Archaeplastida
Gb_18139	No alias	transcription factor (AP2)	0.02	Archaeplastida
Gb_39931	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os01g59780.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os03g12950.1	No alias	no description available(sp\|q84z02\|crl5_orysj : 102.0)	0.03	Archaeplastida
LOC_Os03g56050.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os06g05340.1	No alias	transcription factor (AP2). RAM1-dependent transcription...	0.03	Archaeplastida
LOC_Os06g43220.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os07g03250.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
LOC_Os07g39110.2	No alias	no hits & (original description: none)	0.06	Archaeplastida
LOC_Os08g34360.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os12g03290.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_10005612g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_30905g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_75070g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_8090186g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.04	Archaeplastida
MA_95471g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
Mp7g13270.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Mp8g11450.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Pp3c12_12460V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c15_24790V3.1	No alias	AINTEGUMENTA-like 5	0.03	Archaeplastida
Pp3c15_24980V3.1	No alias	AINTEGUMENTA-like 5	0.02	Archaeplastida
Pp3c15_4400V3.1	No alias	target of early activation tagged (EAT) 2	0.02	Archaeplastida
Solyc02g092050.3.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Solyc04g077490.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc05g051380.4.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc06g075510.4.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc11g008560.2.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc11g061750.2.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc11g072600.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc12g010490.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e005817_P003	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e006752_P001	No alias	transcription factor (AP2)	0.04	Archaeplastida
Zm00001e011539_P001	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e011951_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015104_P001	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e018951_P001	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e019489_P001	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e027593_P003	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e034197_P002	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e037696_P002	No alias	transcription factor (AP2)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
MF	GO:0008762	UDP-N-acetylmuramate dehydrogenase activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	238	289
IPR001471	AP2/ERF_dom	139	195

External Links

No external refs found!

AMTR_s00019p00225230 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation