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  5. Smo76653

Smo76653


Description : Chromatin organisation.histones.H2A-type histone


Gene families : OG0000174 (Archaeplastida) Phylogenetic Tree(s): OG0000174_tree ,
OG_05_0000204 (LandPlants) Phylogenetic Tree(s): OG_05_0000204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo76653
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00215390 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
AMTR_s00058p00158560 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
AMTR_s00115p00128810 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
AT1G08880 GAMMA-H2AX,... Histone superfamily protein 0.02 Archaeplastida
AT1G51060 HTA10 histone H2A 10 0.02 Archaeplastida
AT1G54690 GAMMA-H2AX,... gamma histone variant H2AX 0.03 Archaeplastida
AT4G27230 HTA2 histone H2A 2 0.02 Archaeplastida
AT5G54640 RAT5, HTA1, ATHTA1 Histone superfamily protein 0.01 Archaeplastida
AT5G59870 HTA6 histone H2A 6 0.02 Archaeplastida
Cre06.g264750 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g264950 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g265350 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g266700 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g268050 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g268300 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g271350 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g273900 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g274200 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g274800 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g275850 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g276500 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre06.g276950 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre12.g504500 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre12.g504750 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre12.g505550 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre12.g506250 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre13.g570100 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre13.g590800 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre13.g591150 No alias Chromatin organisation.histones.H2A-type histone 0.01 Archaeplastida
Cre17.g708550 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre17.g709200 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre17.g710400 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre17.g711700 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre17.g713400 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Cre17.g714500 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
GSVIVT01002735001 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
GSVIVT01011034001 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
GSVIVT01031123001 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Gb_06384 No alias histone (H2A) 0.01 Archaeplastida
Gb_07070 No alias histone (H2A) 0.02 Archaeplastida
Gb_25326 No alias histone (H2A) 0.05 Archaeplastida
Gb_37579 No alias histone (H2A) 0.02 Archaeplastida
Gb_39944 No alias histone (H2A) 0.02 Archaeplastida
LOC_Os03g17100.1 No alias histone (H2A) 0.02 Archaeplastida
LOC_Os05g02300.1 No alias histone (H2A) 0.02 Archaeplastida
LOC_Os07g36140.1 No alias histone (H2A) 0.02 Archaeplastida
LOC_Os08g33100.1 No alias histone (H2A) 0.03 Archaeplastida
MA_10425800g0010 No alias histone (H2A) 0.03 Archaeplastida
MA_10426943g0010 No alias histone (H2A) 0.02 Archaeplastida
MA_169054g0020 No alias histone (H2A) 0.02 Archaeplastida
MA_213048g0010 No alias histone (H2A) 0.03 Archaeplastida
MA_22203g0020 No alias histone (H2A) 0.02 Archaeplastida
MA_427046g0010 No alias histone (H2A) 0.02 Archaeplastida
MA_7320190g0010 No alias histone (H2A) 0.02 Archaeplastida
MA_94328g0020 No alias histone (H2A) 0.02 Archaeplastida
MA_962778g0010 No alias histone (H2A) 0.02 Archaeplastida
Mp2g00760.1 No alias histone (H2A) 0.02 Archaeplastida
Mp3g00840.1 No alias histone (H2A) 0.03 Archaeplastida
Pp3c10_13610V3.1 No alias gamma histone variant H2AX 0.02 Archaeplastida
Pp3c3_30120V3.1 No alias Histone superfamily protein 0.04 Archaeplastida
Pp3c5_1800V3.1 No alias histone H2A 10 0.01 Archaeplastida
Solyc01g099410.3.1 No alias histone (H2A) 0.02 Archaeplastida
Solyc03g005220.4.1 No alias histone (H2A) 0.02 Archaeplastida
Solyc06g084430.4.1 No alias histone (H2A) 0.02 Archaeplastida
Solyc09g010400.3.1 No alias histone (H2A) 0.02 Archaeplastida
Solyc09g074300.1.1 No alias histone (H2A) 0.02 Archaeplastida
Solyc09g082710.3.1 No alias histone (H2A) 0.02 Archaeplastida
Solyc10g006560.4.1 No alias histone (H2A) 0.04 Archaeplastida
Solyc11g073250.2.1 No alias histone (H2A) 0.02 Archaeplastida
Solyc12g005270.2.1 No alias histone (H2A) 0.02 Archaeplastida
Zm00001e010232_P001 No alias histone (H2A) 0.02 Archaeplastida
Zm00001e010516_P001 No alias histone (H2A) 0.02 Archaeplastida
Zm00001e011643_P001 No alias histone (H2A) 0.02 Archaeplastida
Zm00001e012144_P001 No alias histone (H2A) 0.02 Archaeplastida
Zm00001e020483_P001 No alias histone (H2A) 0.02 Archaeplastida
Zm00001e033014_P001 No alias histone (H2A) 0.03 Archaeplastida
Zm00001e034815_P001 No alias histone (H2A) 0.04 Archaeplastida
Zm00001e038465_P002 No alias histone (H2A) 0.02 Archaeplastida
Zm00001e039735_P001 No alias histone (H2A) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 11 88
No external refs found!