- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana
Gene families : OG0000152 (Archaeplastida) Phylogenetic Tree(s): OG0000152_tree ,
OG_05_0008357 (LandPlants) Phylogenetic Tree(s): OG_05_0008357_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo77588 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_12501 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003883 | CTP synthase activity | IEP | Neighborhood |
| MF | GO:0004645 | phosphorylase activity | IEP | Neighborhood |
| BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006772 | thiamine metabolic process | IEP | Neighborhood |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
| BP | GO:0006862 | nucleotide transport | IEP | Neighborhood |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Neighborhood |
| BP | GO:0015748 | organophosphate ester transport | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
| BP | GO:0017144 | drug metabolic process | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 328 | 377 |
| No external refs found! |