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  5. Smo78344

Smo78344


Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Prp17 component


Gene families : OG0005608 (Archaeplastida) Phylogenetic Tree(s): OG0005608_tree ,
OG_05_0006441 (LandPlants) Phylogenetic Tree(s): OG_05_0006441_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo78344
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000663.18 No alias No description available 0.01 Archaeplastida
Cre04.g226450 No alias RNA processing.RNA splicing.spliceosome-associated... 0.06 Archaeplastida
GSVIVT01020240001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 Archaeplastida
Gb_09562 No alias component Prp17 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
MA_10432915g0010 No alias component Prp17 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
Mp1g17450.1 No alias component Prp17 of non-snRNP MOS4-associated complex 0.04 Archaeplastida
Pp3c5_27650V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Solyc02g078970.4.1 No alias component Prp17 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Zm00001e001921_P002 No alias component Prp17 of non-snRNP MOS4-associated complex 0.07 Archaeplastida
Zm00001e038006_P002 No alias component Prp17 of non-snRNP MOS4-associated complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 246 284
No external refs found!