Smo78497

Description : Pumilio homolog 1 OS=Arabidopsis thaliana

Gene families : OG0000536 (Archaeplastida) Phylogenetic Tree(s): OG0000536_tree ,
OG_05_0000342 (LandPlants) Phylogenetic Tree(s): OG_05_0000342_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo78497
Cluster	HCCA: Cluster_199

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001065.14	No alias	Pumilio homolog 1 OS=Arabidopsis thaliana	0.01	Archaeplastida
Cpa\|evm.model.tig00001065.15	No alias	No description available	0.03	Archaeplastida
Zm00001e027653_P001	No alias	Pumilio homolog 2 OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0005319	lipid transporter activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006364	rRNA processing	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0016072	rRNA metabolic process	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	257	283

External Links

No external refs found!