- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-3 Golgi to vacuole cargo adaptor complex.AP3S small sigma subunit
Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree ,
OG_05_0007850 (LandPlants) Phylogenetic Tree(s): OG_05_0007850_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo79294 | |
| Cluster | HCCA: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00059p00025420 | evm_27.TU.AmTr_v1... | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00020780.8 | No alias | AP-2 complex subunit sigma OS=Arabidopsis thaliana | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005856 | cytoskeleton | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| CC | GO:0015629 | actin cytoskeleton | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0019725 | cellular homeostasis | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0045454 | cell redox homeostasis | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
| BP | GO:0065008 | regulation of biological quality | IEP | Neighborhood |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Neighborhood |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022775 | AP_mu_sigma_su | 1 | 142 |
| No external refs found! |