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  5. Smo79566

Smo79566


Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component


Gene families : OG0005297 (Archaeplastida) Phylogenetic Tree(s): OG0005297_tree ,
OG_05_0005927 (LandPlants) Phylogenetic Tree(s): OG_05_0005927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo79566
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cre12.g513500 No alias RNA processing.RNA splicing.spliceosome-associated... 0.04 Archaeplastida
GSVIVT01006714001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 Archaeplastida
Gb_19093 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
LOC_Os07g44970.1 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Pp3c1_10210V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Solyc01g086990.3.1 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Zm00001e010869_P001 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.06 Archaeplastida
Zm00001e035711_P001 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008847 Suf 510 639
No external refs found!