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  4. Sequence
  5. Smo80215

Smo80215


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo80215
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00110540 evm_27.TU.AmTr_v1... Transcription factor MYB80 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
LOC_Os01g28280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g13570.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Pp3c10_10240V3.1 No alias Homeodomain-like protein 0.02 Archaeplastida
Smo101484 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Solyc11g071300.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!