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  5. Smo82072

Smo82072


Description : Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo82072
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00141780 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
AMTR_s00001p00155170 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g46790,... 0.02 Archaeplastida
MA_10429837g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
MA_10436764g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_104937g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.02 Archaeplastida
MA_11765g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
MA_30632g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
MA_49545g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
MA_59148g0010 No alias RNA editing factor (MEF11) 0.02 Archaeplastida
MA_656915g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
Smo117959 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.03 Archaeplastida
Smo126928 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Smo130453 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Smo61257 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.05 Archaeplastida
Smo72257 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.03 Archaeplastida
Smo80739 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Smo86405 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Smo87961 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Smo90996 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.04 Archaeplastida
Smo97343 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.03 Archaeplastida
Smo99993 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0007346 regulation of mitotic cell cycle IEP Neighborhood
BP GO:0010564 regulation of cell cycle process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0032465 regulation of cytokinesis IEP Neighborhood
BP GO:0032954 regulation of cytokinetic process IEP Neighborhood
BP GO:0032955 regulation of division septum assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051302 regulation of cell division IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:1901891 regulation of cell septum assembly IEP Neighborhood
BP GO:1902412 regulation of mitotic cytokinesis IEP Neighborhood
BP GO:1903436 regulation of mitotic cytokinetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 285 332
No external refs found!