Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.408
Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN-type)
Gene families : OG0000353 (Archaeplastida) Phylogenetic Tree(s): OG0000353_tree ,
OG_05_0000237 (LandPlants) Phylogenetic Tree(s): OG_05_0000237_tree ,
OG_06_0000465 (SeedPlants) Phylogenetic Tree(s): OG_06_0000465_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00019p00250330 | |
Cluster | HCCA: Cluster_9 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00101p00149240 | evm_27.TU.AmTr_v1... | Solute transport.carrier-mediated transport.BART... | 0.06 | Archaeplastida | |
AT1G70940 | PIN3, ATPIN3 | Auxin efflux carrier family protein | 0.03 | Archaeplastida | |
AT1G73590 | ATPIN1, PIN1 | Auxin efflux carrier family protein | 0.03 | Archaeplastida | |
AT2G01420 | ATPIN4, PIN4 | Auxin efflux carrier family protein | 0.02 | Archaeplastida | |
AT5G57090 | EIR1, WAV6,... | Auxin efflux carrier family protein | 0.07 | Archaeplastida | |
GSVIVT01008430001 | No alias | Solute transport.carrier-mediated transport.BART... | 0.05 | Archaeplastida | |
GSVIVT01011755001 | No alias | Solute transport.carrier-mediated transport.BART... | 0.03 | Archaeplastida | |
GSVIVT01011756001 | No alias | Solute transport.carrier-mediated transport.BART... | 0.06 | Archaeplastida | |
GSVIVT01031663001 | No alias | Solute transport.carrier-mediated transport.BART... | 0.04 | Archaeplastida | |
Gb_37787 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.03 | Archaeplastida | |
LOC_Os01g45550.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.03 | Archaeplastida | |
LOC_Os01g51780.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.04 | Archaeplastida | |
LOC_Os05g50140.2 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.06 | Archaeplastida | |
LOC_Os06g12610.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.04 | Archaeplastida | |
LOC_Os06g44970.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.02 | Archaeplastida | |
LOC_Os11g02950.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.03 | Archaeplastida | |
LOC_Os11g04190.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.02 | Archaeplastida | |
MA_100472g0010 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.04 | Archaeplastida | |
Solyc01g068410.4.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.03 | Archaeplastida | |
Solyc03g118740.3.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.05 | Archaeplastida | |
Solyc04g056620.2.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.05 | Archaeplastida | |
Solyc06g059730.3.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.03 | Archaeplastida | |
Solyc07g006900.2.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.04 | Archaeplastida | |
Zm00001e019540_P001 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.03 | Archaeplastida | |
Zm00001e024071_P002 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.02 | Archaeplastida | |
Zm00001e037682_P001 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.07 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003840 | obsolete gamma-glutamyltransferase activity | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Neighborhood |
BP | GO:0006749 | glutathione metabolic process | IEP | Neighborhood |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004776 | Mem_trans | 10 | 620 |
No external refs found! |