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  5. Smo88108

Smo88108


Description : RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-VAL transcription factor


Gene families : OG0002264 (Archaeplastida) Phylogenetic Tree(s): OG0002264_tree ,
OG_05_0002646 (LandPlants) Phylogenetic Tree(s): OG_05_0002646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo88108
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
Pp3c7_7990V3.1 No alias high-level expression of sugar-inducible gene 2 0.03 Archaeplastida
Solyc06g082520.3.1 No alias transcription factor (LAV-VAL) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 303 401
No external refs found!