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  5. Smo90198

Smo90198


Description : Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.MCM3 component


Gene families : OG0005267 (Archaeplastida) Phylogenetic Tree(s): OG0005267_tree ,
OG_05_0005878 (LandPlants) Phylogenetic Tree(s): OG_05_0005878_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo90198
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00257050 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.06 Archaeplastida
Cre06.g295700 No alias Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.02 Archaeplastida
GSVIVT01021426001 No alias Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.06 Archaeplastida
Gb_01563 No alias component MCM3 of MCM replicative DNA helicase complex 0.03 Archaeplastida
LOC_Os05g39850.1 No alias component MCM3 of MCM replicative DNA helicase complex 0.04 Archaeplastida
MA_138102g0010 No alias component MCM3 of MCM replicative DNA helicase complex 0.03 Archaeplastida
MA_163650g0010 No alias component MCM3 of MCM replicative DNA helicase complex 0.08 Archaeplastida
Mp1g17650.1 No alias component MCM3 of MCM replicative DNA helicase complex 0.07 Archaeplastida
Pp3c20_6190V3.1 No alias Minichromosome maintenance (MCM2/3/5) family protein 0.02 Archaeplastida
Solyc02g070780.4.1 No alias component MCM3 of MCM replicative DNA helicase complex 0.07 Archaeplastida
Zm00001e031913_P001 No alias component MCM3 of MCM replicative DNA helicase complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001208 MCM_dom 278 500
No external refs found!