- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : B2 protein OS=Daucus carota
Gene families : OG0000238 (Archaeplastida) Phylogenetic Tree(s): OG0000238_tree ,
OG_05_0000581 (LandPlants) Phylogenetic Tree(s): OG_05_0000581_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo91200 | |
| Cluster | HCCA: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01001088001 | No alias | No description available | 0.02 | Archaeplastida | |
| LOC_Os05g51590.1 | No alias | B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 248.0) | 0.02 | Archaeplastida | |
| MA_112899g0010 | No alias | B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 90.5) | 0.02 | Archaeplastida | |
| MA_74199g0010 | No alias | B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 236.0) | 0.03 | Archaeplastida | |
| Mp1g14410.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Solyc08g082610.4.1 | No alias | B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 303.0) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Neighborhood |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Neighborhood |
| MF | GO:0004620 | phospholipase activity | IEP | Neighborhood |
| MF | GO:0004629 | phospholipase C activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Neighborhood |
| BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
| BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016298 | lipase activity | IEP | Neighborhood |
| MF | GO:0016791 | phosphatase activity | IEP | Neighborhood |
| MF | GO:0017025 | TBP-class protein binding | IEP | Neighborhood |
| BP | GO:0019915 | lipid storage | IEP | Neighborhood |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Neighborhood |
| MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0051235 | maintenance of location | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| MF | GO:0070403 | NAD+ binding | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0098519 | nucleotide phosphatase activity, acting on free nucleotides | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013989 | Dev_and_cell_death_domain | 31 | 155 |
| No external refs found! |