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Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component
Gene families : OG0004085 (Archaeplastida) Phylogenetic Tree(s): OG0004085_tree ,
OG_05_0004491 (LandPlants) Phylogenetic Tree(s): OG_05_0004491_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo94273 | |
| Cluster | HCCA: Cluster_148 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G60820 | PBF1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases)... | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00001339.5 | No alias | Protein degradation.26S proteasome.20S core... | 0.04 | Archaeplastida | |
| Cre26.g756797 | No alias | Protein degradation.26S proteasome.20S core... | 0.04 | Archaeplastida | |
| GSVIVT01027613001 | No alias | Protein degradation.26S proteasome.20S core... | 0.04 | Archaeplastida | |
| LOC_Os09g32800.1 | No alias | component beta type-6 of 26S proteasome | 0.06 | Archaeplastida | |
| MA_207139g0010 | No alias | component beta type-6 of 26S proteasome | 0.02 | Archaeplastida | |
| Mp1g12450.1 | No alias | component beta type-6 of 26S proteasome | 0.07 | Archaeplastida | |
| Pp3c16_16960V3.1 | No alias | N-terminal nucleophile aminohydrolases (Ntn hydrolases)... | 0.05 | Archaeplastida | |
| Solyc02g084920.3.1 | No alias | component beta type-6 of 26S proteasome | 0.09 | Archaeplastida | |
| Zm00001e010121_P001 | No alias | component beta type-6 of 26S proteasome | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001353 | Proteasome_sua/b | 16 | 211 |
| No external refs found! |