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  5. Smo94524

Smo94524


Description : 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0000908 (LandPlants) Phylogenetic Tree(s): OG_05_0000908_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo94524
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00253450 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
AMTR_s00092p00172590 evm_27.TU.AmTr_v1... Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.03 Archaeplastida
AT1G30100 ATNCED5, NCED5 nine-cis-epoxycarotenoid dioxygenase 5 0.02 Archaeplastida
LOC_Os02g47510.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.04 Archaeplastida
MA_10425950g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
Solyc08g075480.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 8 115
No external refs found!