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Description : Cell cycle.regulation.cyclins.CYCA-type cyclin
Gene families : OG0000635 (Archaeplastida) Phylogenetic Tree(s): OG0000635_tree ,
OG_05_0000438 (LandPlants) Phylogenetic Tree(s): OG_05_0000438_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo97411 | |
| Cluster | HCCA: Cluster_178 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272790 | evm_27.TU.AmTr_v1... | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.07 | Archaeplastida | |
| AMTR_s00048p00184670 | evm_27.TU.AmTr_v1... | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.03 | Archaeplastida | |
| AMTR_s00068p00198800 | No alias | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.07 | Archaeplastida | |
| AT1G44110 | CYCA1;1 | Cyclin A1;1 | 0.07 | Archaeplastida | |
| AT5G43080 | CYCA3;1 | Cyclin A3;1 | 0.04 | Archaeplastida | |
| Cpa|evm.model.tig00000076.67 | No alias | Cyclin-A2-1 OS=Oryza sativa subsp. japonica | 0.02 | Archaeplastida | |
| Cre03.g207900 | No alias | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.01 | Archaeplastida | |
| GSVIVT01008823001 | No alias | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.06 | Archaeplastida | |
| GSVIVT01009399001 | No alias | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.04 | Archaeplastida | |
| GSVIVT01035718001 | No alias | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.02 | Archaeplastida | |
| Gb_03779 | No alias | cyclin (CYCA) | 0.06 | Archaeplastida | |
| Gb_07594 | No alias | cyclin (CYCA) | 0.08 | Archaeplastida | |
| Gb_10619 | No alias | cyclin (CYCA) | 0.07 | Archaeplastida | |
| Gb_21011 | No alias | cyclin (CYCA) | 0.05 | Archaeplastida | |
| LOC_Os01g13260.1 | No alias | cyclin (CYCA) | 0.02 | Archaeplastida | |
| LOC_Os03g41100.1 | No alias | cyclin (CYCA) | 0.06 | Archaeplastida | |
| LOC_Os12g31810.1 | No alias | cyclin (CYCA) | 0.05 | Archaeplastida | |
| LOC_Os12g39210.1 | No alias | cyclin (CYCA) | 0.03 | Archaeplastida | |
| MA_103138g0010 | No alias | cyclin (CYCA) | 0.05 | Archaeplastida | |
| MA_28323g0010 | No alias | cyclin (CYCA) | 0.04 | Archaeplastida | |
| MA_6619g0010 | No alias | cyclin (CYCA) | 0.05 | Archaeplastida | |
| MA_88982g0010 | No alias | cyclin (CYCA) | 0.04 | Archaeplastida | |
| Mp2g25500.1 | No alias | cyclin (CYCA) | 0.07 | Archaeplastida | |
| Pp3c17_22710V3.1 | No alias | Cyclin A1;1 | 0.02 | Archaeplastida | |
| Pp3c1_38770V3.1 | No alias | Cyclin A1;1 | 0.02 | Archaeplastida | |
| Pp3c2_8700V3.1 | No alias | Cyclin A1;1 | 0.02 | Archaeplastida | |
| Pp3c2_8770V3.1 | No alias | Cyclin A1;1 | 0.02 | Archaeplastida | |
| Pp3c2_9020V3.1 | No alias | Cyclin A1;1 | 0.04 | Archaeplastida | |
| Solyc03g120440.3.1 | No alias | cyclin (CYCA) | 0.02 | Archaeplastida | |
| Solyc04g078310.3.1 | No alias | cyclin (CYCA) | 0.04 | Archaeplastida | |
| Solyc06g065680.3.1 | No alias | cyclin (CYCA) | 0.02 | Archaeplastida | |
| Solyc11g005090.2.1 | No alias | cyclin (CYCA) | 0.04 | Archaeplastida | |
| Solyc12g088470.3.1 | No alias | cyclin (CYCA) | 0.06 | Archaeplastida | |
| Solyc12g088500.2.1 | No alias | cyclin (CYCA) | 0.03 | Archaeplastida | |
| Solyc12g088520.2.1 | No alias | cyclin (CYCA) | 0.04 | Archaeplastida | |
| Zm00001e005138_P001 | No alias | cyclin (CYCA) | 0.03 | Archaeplastida | |
| Zm00001e012454_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e013250_P002 | No alias | cyclin (CYCA) | 0.04 | Archaeplastida | |
| Zm00001e017335_P001 | No alias | cyclin (CYCA) | 0.06 | Archaeplastida | |
| Zm00001e026125_P002 | No alias | cyclin (CYCA) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
| CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006671 | Cyclin_N | 49 | 175 |
| No external refs found! |