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  5. Solyc00g500094.1.1

Solyc00g500094.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 122.0)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500094.1.1
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
Solyc01g014963.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g065625.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g065987.1.1 No alias No annotation 0.06 Archaeplastida
Solyc01g081455.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc01g106575.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Solyc01g150141.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Solyc02g071383.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Solyc02g150125.1.1 No alias No annotation 0.04 Archaeplastida
Solyc03g083485.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc03g111705.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc03g119905.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc04g049075.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc04g064805.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc04g150146.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Solyc05g013617.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc05g015651.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g050825.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.05 Archaeplastida
Solyc06g034395.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Solyc06g035495.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc06g036255.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc06g053665.1.1 No alias No annotation 0.05 Archaeplastida
Solyc06g066853.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc07g019493.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc07g041755.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g043685.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.05 Archaeplastida
Solyc07g044985.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc08g065543.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g074655.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc09g011125.1.1 No alias No annotation 0.05 Archaeplastida
Solyc09g064243.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.05 Archaeplastida
Solyc09g074575.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Solyc10g008455.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g018203.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g038045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Solyc10g074433.1.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc10g074475.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Solyc10g074824.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g076405.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida
Solyc11g012995.1.1 No alias No annotation 0.05 Archaeplastida
Solyc11g027895.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.04 Archaeplastida
Solyc12g035192.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g042855.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!