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Description : phenylalanine ammonia lyase (PAL)
Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0011968 (SeedPlants) Phylogenetic Tree(s): OG_06_0011968_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc00g500353.1.1 | |
| Cluster | HCCA: Cluster_69 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.06 | Archaeplastida | |
| GSVIVT01015124001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| GSVIVT01015138001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01024292001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| GSVIVT01024293001 | No alias | Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... | 0.03 | Archaeplastida | |
| GSVIVT01024294001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| Gb_21115 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| LOC_Os02g41630.2 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| LOC_Os02g41670.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| LOC_Os02g41680.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| LOC_Os05g35290.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| MA_632036g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_73113g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Mp1g05190.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Mp4g14110.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Mp4g14140.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Mp4g14160.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Mp7g14880.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Pp3c1_18680V3.1 | No alias | phenyl alanine ammonia-lyase 3 | 0.02 | Archaeplastida | |
| Pp3c24_13110V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.02 | Archaeplastida | |
| Zm00001e007573_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Zm00001e015156_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Zm00001e023031_P002 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Zm00001e023033_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| BP | GO:0005991 | trehalose metabolic process | IEP | Neighborhood |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| MF | GO:0008061 | chitin binding | IEP | Neighborhood |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Neighborhood |
| BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 64 | 415 |
| No external refs found! |