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  5. Solyc01g004004.1.1

Solyc01g004004.1.1


Description : no hits & (original description: none)


Gene families : OG0002192 (Archaeplastida) Phylogenetic Tree(s): OG0002192_tree ,
OG_05_0001482 (LandPlants) Phylogenetic Tree(s): OG_05_0001482_tree ,
OG_06_0000787 (SeedPlants) Phylogenetic Tree(s): OG_06_0000787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g004004.1.1
Cluster HCCA: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500355.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500381.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g150103.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g095785.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g150130.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g005205.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!